Automating colony PCR screening
Screening hundreds of colonies is high-throughput, low-precision work. Where a colony PCR workflow can relax and where it still cannot cut corners.
Liquid handling in context: assays, sample prep, and workflows where getting the volume right decides the result.
Screening hundreds of colonies is high-throughput, low-precision work. Where a colony PCR workflow can relax and where it still cannot cut corners.
Digital PCR counts molecules by partitioning a reaction thousands of ways. Why that makes the setup pipetting unusually unforgiving, and how to meet the bar.
RNA is fragile and the RT step sets the ceiling on everything downstream. The cold-chain, RNase, and one-step versus two-step choices that automation has to respect.
A multiplex works only if no primer pair crowds out the rest. The many small oligo transfers and ratio balancing that building a pool actually requires.
A standard curve is only as good as its dilutions. How log-scale error propagates, and the pipetting discipline that keeps a curve linear and efficient.
Equal template mass per well is what makes results comparable. The per-well dilution math and the small-volume transfers that make normalization real.
The batch math, dead volume, and viscosity handling that keep the first well and the last well of a plate carrying the same reaction.
Glycerol is not one liquid. Its viscosity climbs steeply with concentration, so the settings that work at 50 percent are wrong at 80 and useless at 100.
Biological fluids clot, foam from protein, and coat the tip in a film that fools level detection. What a class for whole blood or serum has to account for.
Mass spec quantitation is only as good as the standards and dilutions feeding it. Here is how to keep low-volume transfers accurate for LC-MS/MS.
ELISA lives or dies on even, gentle, well-timed liquid handling. Here are the dispense, wash, and reagent-addition settings that keep plates consistent.
Setting up PCR plates by hand is tedious and error prone. The liquid-class settings that protect ratio fidelity at a few microliters and keep amplicon out.
Normalization takes a plate of unequal concentrations to a common target. Variable volumes, one class, and a minimum-transfer floor that decides feasibility.
DMSO is the backbone solvent of compound libraries and one of the hardest liquids to pipette well. Viscosity, water uptake, and freeze-thaw all move the target.
SPRI and magnetic-bead cleanups live or die on supernatant removal. The class settings that clear liquid off an engaged pellet without carrying beads away.
Library prep stacks dozens of small, ratio-sensitive transfers. Here is how to automate it without letting pipetting error compound into failed libraries.